Since I don't use cygwin, I cannot say, but this line
/home/semikin/builds/fricas_110929/fricas-build/build/i686-pc-cygwin/bin/notangle: No such file or directory
looks somehow suspicious. You obviously don't have noweb installed. Noweb is only in the distributed fricas packages but not in the source tree, you if you compile from trunk you have to make sure that noweb is otherwise installed.
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