In a bash shell, I define the path (needed both by Galaxy to find the right version of python and by tools that run on a cluster to find the executables) and some other global variables on the command line. The cluster jobs (LSF) inherit all these values. This is my line

PATH=/usr/bin:/software/solexa/bin:$PATH  http_proxy="http://somecache:3128"; sh 

Is there anything inherently wrong with this simple solution?


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