Hello Dannon,

This looks exactly like how I would like to run a workflow.  I'll be
trying this out next week and will let you know how it goes.  Thanks
much!

Darren

On Sat, Mar 5, 2011 at 1:51 PM, Dannon Baker <dannonba...@me.com> wrote:
> Darren,
>
> A first pass at adding workflows to the Galaxy API is now available.  For an 
> example of how to execute a basic workflow, see 
> scripts/api/execute_workflow.py.  An example of how this might integrate into 
> a slightly more complex script using library uploads is available at 
> scripts/api/example_watch_folder.py.  This preliminary version doesn't allow 
> runtime modification of tool parameters, so the workflow must not make use of 
> the 'set at runtime' option, but that feature will be available soon.
>
> The API itself is relatively undocumented, though some basic hints and usage 
> examples can be found in /scripts/api/README
>
> Let me know if you have questions or feedback!
>
> -Dannon
>
> On Mar 2, 2011, at 2:40 PM, Darren Brown wrote:
>
>> Hello Dannon,
>>
>> That is surprising and excellent!  Can't wait to hear more.
>>
>> Take care,
>>
>> Darren
>>
>> On Wed, Mar 2, 2011 at 11:38 AM, Dannon Baker <dannonba...@me.com> wrote:
>>> Darren,
>>>
>>> While this is not currently possible, I'm currently finishing up a first 
>>> pass on a workflow API that will allow this sort of interaction and hope to 
>>> have an early version available by the end of this week.  I can update you 
>>> when that has been committed.
>>>
>>> -Dannon
>>>
>>> On Feb 24, 2011, at 9:29 PM, Darren Brown wrote:
>>>
>>>> Hello folks,
>>>>
>>>> I am using a workflow that needs to be run many times on many
>>>> different inputs.  I have hacked around and figured out how to pull
>>>> multiple inputs from a history, but I am a little baffled on how to
>>>> run a galaxy workflow programatically.  I have searched around fairly
>>>> exhaustively and am wondering if this is something that anyone else
>>>> has come across and accomplished.  And links or pointers?
>>>>
>>>> Take care,
>>>>
>>>> Darren
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>>>
>
>

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