I am at step 2 of Galaxy CloudMan deployment.
"Now, manipulate Galaxy as desired."

How do I test that my updates are working before proceeding to step 3?

I assumed I could just type 'run.sh'. This starts Galaxy but:
- fasta files do not display in the middle pane
- png images generated by e.g. boxplot do not display in the middle pane
- saving images does not work (get empty file)

I need to know how people are customizing their cloud instance of galaxy. If it 
is NOT possible to test modifications in the usual way PLEASE would somebody 
simply confirm?

I really would appreciate a response. 

Isabelle Phan, DPhil
Seattle Biomedical Research Institute
+1(206)256 7113

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