Assaf Gordon wrote:
> Forgot to mention SGE/PBS: you definitely want to use them (even if you're
> using a single machine),
> because the local job runner doesn't take into account multi-threaded
> programs when scheduling jobs.
> So another core is needed for the SGE scheduler daemons (sge_qmaster and
I haven't tested, but it's entirely possible that the SGE daemons could
happily share cores with other processes. I'd be surprised if they
spent a whole lot of time on-CPU.
A cluster runner is recommended for other reasons, too - restartability
of the Galaxy process is one of the big ones.
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