Hi Jeremy,

I just updated to the newest galaxy-dist and the export of the workflow still does not work. The error is the same.


Best regards,
Sarah


On 04/07/2011 03:37 PM, Jeremy Goecks wrote:
Hi Sarah,

I created your workflow on my Galaxy instance and was able to export it 
successfully, so updating your Galaxy instance may solve your problem. If not, 
let us know and we'll take a closer look.

Finally, please direct your questions to one of our mailing lists rather than 
individual galaxy developers for community and archival purposes; I've cc'd 
this one to galaxy-dev.

Thanks,
J.


On Apr 7, 2011, at 8:00 AM, Sarah Diehl wrote:

Hi Jeremy,

I encounter a similar error like the one already posted on the galaxy-dev list 
(http://lists.bx.psu.edu/pipermail/galaxy-dev/2010-November/003699.html) when 
trying to download a workflow.

Were you able to find a solution or are you still working on it? I attached a 
screenshot of the workflow (like you also requested on the list). Let me know 
if I can provide you with any additional details to help with the debugging.

Best regards,
Sarah



10.1.5.190 - - [07/Apr/2011:13:33:42 +0200] "GET /workflow/export_to_file?id=0ac5da8467dc9e07 
HTTP/1.1" 500 - "http://solweb2.immunbio.mpg.de/workflow/export?id=0ac5da8467dc9e07"; 
"Mozilla/5.0 (X11; U; Linux x86_64; en-US; rv:1.9.2.16) Gecko/20110322 fil
e:///home/diehl/Pictures/Screenshot.png
Fedora/3.6.16-1.fc14 Firefox/3.6.16"
Error -<type 'exceptions.TypeError'>: 'WorkflowStep' object is unsubscriptable
URL: http://solweb2.immunbio.mpg.de/workflow/export_to_file?id=0ac5da8467dc9e07
File 
'/galaxy/galaxy_server/eggs/Paste-1.6-py2.6.egg/paste/exceptions/errormiddleware.py',
 line 143 in __call__
  app_iter = self.application(environ, start_response)
File '/galaxy/galaxy_server/eggs/Paste-1.6-py2.6.egg/paste/recursive.py', line 
80 in __call__
  return self.application(environ, start_response)
File '/galaxy/galaxy_server/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py', 
line 632 in __call__
  return self.application(environ, start_response)
File '/galaxy/galaxy_server/lib/galaxy/web/framework/base.py', line 145 in 
__call__
  body = method( trans, **kwargs )
File '/galaxy/galaxy_server/lib/galaxy/web/framework/__init__.py', line 74 in 
decorator
  return simplejson.dumps( func( self, trans, *args, **kwargs ), indent=4, 
sort_keys=True )
File '/galaxy/galaxy_server/lib/galaxy/web/controllers/workflow.py', line 1078 
in export_to_file
  stored_dict = self._workflow_to_dict( trans, stored )
File '/galaxy/galaxy_server/lib/galaxy/web/controllers/workflow.py', line 1571 
in _workflow_to_dict
  step['inputs'].append( { "name" : name, "description" : "runtime parameter for 
tool %s" % module.get_name() } )
TypeError: 'WorkflowStep' object is unsubscriptable
<Screenshot.png>


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