Sarah,

Can you make your server available to me and I'll take a look? If not, you'll 
have to do some debugging yourself. Here are some things you might try:

*on your local instance, try exporting simpler workflows and seeing if there's 
a tool or configuration that does or does work. 
*on our public instance, try creating a workflow identical to the one that's 
failing for you and seeing if you can export it.

If we can figure out how to reproduce the problem on a Galaxy instance that I 
have access to, I can probably fix it.

Thanks,
J.

On Apr 14, 2011, at 3:11 AM, Sarah Diehl wrote:

> Hi Jeremy,
> 
> I just updated to the newest galaxy-dist and the export of the workflow still 
> does not work. The error is the same.
> 
> Best regards,
> Sarah
> 
> 
> On 04/07/2011 03:37 PM, Jeremy Goecks wrote:
>> Hi Sarah,
>> 
>> I created your workflow on my Galaxy instance and was able to export it 
>> successfully, so updating your Galaxy instance may solve your problem. If 
>> not, let us know and we'll take a closer look.
>> 
>> Finally, please direct your questions to one of our mailing lists rather 
>> than individual galaxy developers for community and archival purposes; I've 
>> cc'd this one to galaxy-dev.
>> 
>> Thanks,
>> J.
>> 
>> 
>> On Apr 7, 2011, at 8:00 AM, Sarah Diehl wrote:
>> 
>>> Hi Jeremy,
>>> 
>>> I encounter a similar error like the one already posted on the galaxy-dev 
>>> list 
>>> (http://lists.bx.psu.edu/pipermail/galaxy-dev/2010-November/003699.html) 
>>> when trying to download a workflow.
>>> 
>>> Were you able to find a solution or are you still working on it? I attached 
>>> a screenshot of the workflow (like you also requested on the list). Let me 
>>> know if I can provide you with any additional details to help with the 
>>> debugging.
>>> 
>>> Best regards,
>>> Sarah
>>> 
>>> 
>>> 
>>> 10.1.5.190 - - [07/Apr/2011:13:33:42 +0200] "GET 
>>> /workflow/export_to_file?id=0ac5da8467dc9e07 HTTP/1.1" 500 - 
>>> "http://solweb2.immunbio.mpg.de/workflow/export?id=0ac5da8467dc9e07"; 
>>> "Mozilla/5.0 (X11; U; Linux x86_64; en-US; rv:1.9.2.16) Gecko/20110322 fil
>> e:///home/diehl/Pictures/Screenshot.png
>>> Fedora/3.6.16-1.fc14 Firefox/3.6.16"
>>> Error -<type 'exceptions.TypeError'>: 'WorkflowStep' object is 
>>> unsubscriptable
>>> URL: 
>>> http://solweb2.immunbio.mpg.de/workflow/export_to_file?id=0ac5da8467dc9e07
>>> File 
>>> '/galaxy/galaxy_server/eggs/Paste-1.6-py2.6.egg/paste/exceptions/errormiddleware.py',
>>>  line 143 in __call__
>>>  app_iter = self.application(environ, start_response)
>>> File '/galaxy/galaxy_server/eggs/Paste-1.6-py2.6.egg/paste/recursive.py', 
>>> line 80 in __call__
>>>  return self.application(environ, start_response)
>>> File 
>>> '/galaxy/galaxy_server/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py', 
>>> line 632 in __call__
>>>  return self.application(environ, start_response)
>>> File '/galaxy/galaxy_server/lib/galaxy/web/framework/base.py', line 145 in 
>>> __call__
>>>  body = method( trans, **kwargs )
>>> File '/galaxy/galaxy_server/lib/galaxy/web/framework/__init__.py', line 74 
>>> in decorator
>>>  return simplejson.dumps( func( self, trans, *args, **kwargs ), indent=4, 
>>> sort_keys=True )
>>> File '/galaxy/galaxy_server/lib/galaxy/web/controllers/workflow.py', line 
>>> 1078 in export_to_file
>>>  stored_dict = self._workflow_to_dict( trans, stored )
>>> File '/galaxy/galaxy_server/lib/galaxy/web/controllers/workflow.py', line 
>>> 1571 in _workflow_to_dict
>>>  step['inputs'].append( { "name" : name, "description" : "runtime parameter 
>>> for tool %s" % module.get_name() } )
>>> TypeError: 'WorkflowStep' object is unsubscriptable
>>> <Screenshot.png>
>> 
>> 
>> ___________________________________________________________
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>> 
> 


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