This is a runtime error, not an update error; it is occurring because we
mistakenly committed code that is not compliant with python 2.4
Here are your options to fix this error:
(1) update your python version from 2.4 to 2.5 or 2.6;
(2) update your installation from galaxy-central; specifically, you'll need
(3) make the changes in changeset manually:
https://bitbucket.org/galaxy/galaxy-central/changeset/1cb94990d839 and then
merge when the next update comes out.
Sorry for the inconvenience.
On Apr 18, 2011, at 5:58 PM, Olen Vance Sluder Jr wrote:
> I was trying to update my existing Galaxy installation to the latest
> release (50e249442c5a) and encounter the following when I start it up:
> Traceback (most recent call last):
> File "/home/galaxy/galaxy-dist/lib/galaxy/web/buildapp.py", line 81,
> in app_factory
> from galaxy.app import UniverseApplication
> File "/home/galaxy/galaxy-dist/lib/galaxy/app.py", line 11, in ?
> from galaxy.tools.imp_exp import load_history_imp_exp_tools
> File "/home/galaxy/galaxy-dist/lib/galaxy/tools/imp_exp/__init__.py",
> line 6, in ?
> from galaxy.web.base.controller import UsesHistory
> File "/home/galaxy/galaxy-dist/lib/galaxy/web/base/controller.py",
> line 12, in ?
> from galaxy.visualization.tracks.data_providers import get_data_provider
> line 13, in ?
> from galaxy.datatypes.util.gff_util import *
> File "/home/galaxy/galaxy-dist/lib/galaxy/datatypes/util/gff_util.py",
> line 152
> SyntaxError: invalid syntax
> I have attached the full script of what I did. I'm not too familiar
> with Mercurial and couldn't find any guidance in the wiki or mailing
> list on exactly what choices to make when Mercurial encountered
> conflicts, so I accepted the "delete" or "other" options when these
> Any help would be appreciated.
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Please keep all replies on the list by using "reply all"
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