Hi Peter, The test framework could use a bit of work, and better handling of grouping-style parameters (such as repeats) is one significant area needing improvement.
The refinements you suggest, hiding add/remove buttons when not applicable, would be good improvements, but I don't know that anyone has plans to address these in the near future. Unfortunately, there is not a way to get the repeat number and dynamically substitute in as a portion of a text parameter's value, but this would be a nice feature to have available. Thanks for using Galaxy, Dan On Apr 19, 2011, at 9:59 AM, Peter Cock wrote: > On Tue, Apr 19, 2011 at 2:23 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote: >> What I need to work out now is how to use repeat parameters in the unit >> tests. There seems to be examples in tools/mutation/visualize.xml and >> tools/plotting/xy_plot.xml which only use the first repeat... > > I've tried to skim all the provided tool XML files using <repeat> and > looked at their <test> entries. It looks like only a single repeat > parameter is being used in the tests currently. > > The commented out <repeat> tags in tools/sr_assembly/velveth.xml > suggest repeat parameters don't work properly in <test> yet. > > The comments in samtools/sam_merge.xml also suggest that (when > written), the test framework didn't handle <repeat> tags properly. > > See also: https://bitbucket.org/galaxy/galaxy-central/issue/175/ > > Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/