I have a tool that takes a zipped archive as input, finds all the
sequence files (~90 of them), separates them by barcode, does a little
extra processing and outputs a single fasta file. I would like this to
run on Galaxy in a workflow with a few other tools.
I know there have been discussions about uploading zip files to Galaxy
before and that currently Galaxy automatically unzips a file and
uploads the first file in the archive. Are there any plans to change
this behaviour and be able to upload a zipped file without
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