Hi

Trying to install Galaxy on local machine, using hg:

hg clone http://bitbucket.org/galaxy/galaxy-dist

 

Get error messages for two eggs:

 

Scrambling the following eggs failed:

  docutils

  GeneTrack

 

Here is more details for docutils (practically same for GeneTrack):

 

[aspunde@ilmnhw-biolin10 galaxy-dist]$ python scripts/scramble.py
docutils

fetch_one(): Using existing source, remove to download again:

 
/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/scripts/scramble/archive
s/docutils-0.7.tar.gz

unpack_source(): Removing old build directory at:

 
/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/scripts/scramble/build/p
y2.6/docutils

unpack_source(): Unpacked to:

 
/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/scripts/scramble/build/p
y2.6/docutils

copy_build_script(): Using build script
/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/scripts/scramble/scripts
/generic.py

run_scramble_script(): Beginning build

run_scramble_script(): Executing in
/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/scripts/scramble/build/p
y2.6/docutils:

  /escher/bioinfoHW/opensource/lib/bin/python scramble.py

Traceback (most recent call last):

  File "scramble.py", line 29, in <module>

    execfile( "setup.py", globals(), locals() )

IOError: [Errno 2] No such file or directory: 'setup.py'

Traceback (most recent call last):

  File "scripts/scramble.py", line 44, in <module>

    egg.scramble()

  File
"/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/lib/galaxy/eggs/scrambl
e.py", line 57, in scramble

    self.run_scramble_script()

  File
"/escher/bioinfoHW/opensource/Galaxy/galaxy-dist/lib/galaxy/eggs/scrambl
e.py", line 206, in run_scramble_script

    raise ScrambleFailure( self, "%s(): Egg build failed for %s %s" % (
sys._getframe().f_code.co_name, self.name, self.version ) )

galaxy.eggs.scramble.ScrambleFailure: run_scramble_script(): Egg build
failed for docutils 0.7

 

Here is basic info about system:

[aspunde@ilmnhw-biolin10 galaxy-dist]$ python --version

Python 2.6

$ hg --version

Mercurial Distributed SCM (version 1.8.3)

$ uname -a

Linux ilmnhw-biolin10.hwus.illumina.com 2.6.18-164.15.1.el5 #1 SMP Wed
Mar 17 11:30:06 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux

 

Thanks

Alex Spunde

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to