Peter Cock wrote: > On Mon, May 16, 2011 at 8:59 PM, Spunde, Alex <aspu...@illumina.com> wrote: > > Same thing: > > > > [aspunde@ilmnhw-biolin10 galaxy-dist]$ python ./scripts/fetch_eggs.py > > Fetched http://eggs.g2.bx.psu.edu/Babel/Babel-0.9.4-py2.6.egg > > Fetched http://eggs.g2.bx.psu.edu/docutils/docutils-0.7-py2.6.egg > > Fetched > > http://eggs.g2.bx.psu.edu/pysqlite/pysqlite-2.5.6_3.6.17_static-py2.6-linux-x86_64-ucs2.egg > > Fetched > > http://eggs.g2.bx.psu.edu/GeneTrack/GeneTrack-2.0.0_beta_1_dev_48da9e998f0caf01c5be731e926f4b0481f658f0-py2.6.egg > > One or more of the python eggs necessary to run Galaxy couldn't be > > downloaded automatically. You can try building them by hand (all > > at once) with: > > python scripts/scramble.py > > Or individually: > > python scripts/scramble.py Babel > > python scripts/scramble.py docutils > > python scripts/scramble.py GeneTrack > > I had a similar issue which was down to the file permissions - sudo fixed it, > and I redid the chown afterwards.
Alex and I had a bit of off-list communication on this one and I forgot to post the eventual solution back to the list. There is a bug here, I haven't yet tracked down the cause, but I found that it can be worked around by repeatedly running scripts/fetch_eggs.py until all eggs are fetched and the script returns with no output. --nate > > Peter > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/ > ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/