Duddy, John wrote:
> That's good news. Is this available via the API as well? I didn't see 
> examples of this anywhere in the code, but I thought it might be available by 
> passing additional values in the dictionary.

I don't think it has been done, but as you say, it may be possible just
via an arg in the dictionary.

--nate

> 
> 
> -----Original Message-----
> From: Nate Coraor [mailto:n...@bx.psu.edu] 
> Sent: Thursday, May 26, 2011 1:38 AM
> To: Duddy, John
> Cc: galaxy-dev@lists.bx.psu.edu
> Subject: Re: [galaxy-dev] Is dynamic associated information per dataset 
> possible?
> 
> Duddy, John wrote:
> > We'd like to be able to associate fixed things (project, Sample, sequencer 
> > used) with user's FASTQ files, and we'd also like to allow users to 
> > associate dynamic, site-specific stuff with the sequencing run. Currently, 
> > users track their runs using a CSV sample sheet, and often they add columns 
> > to that sample sheet for their own information.
> > 
> > Is it possible to associate that information with the FASTQ file when it is 
> > placed in Galaxy? I know about metadata, but the supported fields look like 
> > they are fixed in the code. I was hoping for a solution where the users do 
> > not need to modify the Galaxy code to pull this off.
> 
> Hi John,
> 
> You could accomplish this with library templates:
> 
> https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/LibraryTemplates
> 
> --nate
> 
> > 
> > John Duddy
> > Sr. Staff Software Engineer
> > Illumina, Inc.
> > 9885 Towne Centre Drive
> > San Diego, CA 92121
> > Tel: 858-736-3584
> > E-mail: jdu...@illumina.com<mailto:jdu...@illumina.com>
> > 
> 
> > ___________________________________________________________
> > Please keep all replies on the list by using "reply all"
> > in your mail client.  To manage your subscriptions to this
> > and other Galaxy lists, please use the interface at:
> > 
> >   http://lists.bx.psu.edu/
> 
> 
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to