I am working on getting galaxy to work with the slurm queuing system.
I think i have solved the slurm part of the problem (submit, status,
running etc), but some local problems still exist. Our site is using
the modules system (http://modules.sourceforge.net/) to handle
software, and there are some kinks to work out with that, but as far
as i can see, the slurm is working.
It is still a work in progress, but i think it could be useful for
other people who are trying to do the same thing. All the adaptations
are at the moment very specific for our site, but I hope to make it
possible to integrate it with the vanilla galaxy.
I have a short description of what i have done at this blog:
A bitbucket for the code can be found here:
+46 18 611 59 59
+46 706 70 79 55
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at: