I was wondering how to pass a GTF file to the current Tophat implementation in 
Galaxy. It says that -G/--GTF is an implemented parameter but that option does 
not show up. BTW, what version of tophat is supplied with the most recent 
stable release.

Thanks,

Ilya


Ilya Chorny Ph.D.
Bioinformatics - Intern
icho...@illumina.com<mailto:icho...@illumina.com>
858-202-4582

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