Jennifer Jackson wrote, On 07/19/2011 05:04 PM:
> Do you think it would be helpful to add this into the Tool
> Shed for sharing? I didn't see it there, so apologies if you already
It's not a galaxy tool per-se, are you sure you want to start a "galaxy admin"
section in the toolshed ?
> Jen Galaxy team
> On 7/19/11 11:45 AM, Assaf Gordon wrote:
>> Hi all,
>> I got around to writing the report I always needed: how much time
>> each job actually runs and how much time it spends waiting in the
>> SGE queue.
>> The attached shell script produces the report, combining
>> information from SGE's QACCT with the galaxy job/dataset
>> The output contains: job, user, tool name, dbkey, total input size
>> in bytes, waiting time in SGE queue, actual SGE executiong running
>> time, and some other tidbits.
>> This allows finding how much running time each user had on the
>> cluster, how much time each tool/user spend idly waiting, and some
>> possible correlations between tools, dbkeys, input size and running
>> The script is tightly coupled with SGE and PostgreSQL, but can
>> probably be adapted to PBS/MySQL.
>> Hope this helps someone, -gordon
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