> Putting GOPS into the Galaxy tool search brings up the
> Operate on Genomic Intervals section, is GOPS short
> genomic interval operations?

Correct.

>> *The tool should work with general fasta files right now,
>> so the changes needed to support protein and other
>> fastas should be UI-based only.
> 
> Right, while of course preserving the (now misleading) tool
> ID of  "Extract genomic DNA 1" and filename of
> extract/extract_genomic_dna.xml for backwards
> compatibility.

Only the tool ID is required for backwards compatibility; the filename can be 
changed.

J.
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