Done

On Fri, Aug 12, 2011 at 5:36 AM, Peter Cock <p.j.a.c...@googlemail.com>wrote:

> On Thu, Aug 11, 2011 at 4:11 PM, Jeremy Goecks <jeremy.goe...@emory.edu>
> wrote:
> >>> *The tool should work with general fasta files right now,
> >>> so the changes needed to support protein and other
> >>> fastas should be UI-based only.
> >>
> >> Right, while of course preserving the (now misleading) tool
> >> ID of  "Extract genomic DNA 1" and filename of
> >> extract/extract_genomic_dna.xml for backwards
> >> compatibility.
> >
> > Only the tool ID is required for backwards compatibility; the filename
> can be changed.
>
> OK.
>
> First, some minor house keeping - if you can clarify the text
> for how a user should go from a tabular file to an interval or
> GFF file, that would be good:
>
> https://bitbucket.org/peterjc/galaxy-central/changeset/d41ee8c41532
>
> Could you transplant/merge that please? Its the only commit
> so far on my new branch:
>
> https://bitbucket.org/peterjc/galaxy-central/src/extract_region
>
> Regards,
>
> Peter
>
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