Hi Ilya, Tools should not ordinarily write to this directory, but will often read from it. These files are generated by Galaxy's Metadata functionality. If you are setting metadata externally (settings in universe_wsgi.ini) and using a cluster, then this will occur as part of the tool/job script, as a separate entry (calling set_metadata.sh) in the e.g. .sh file submitted to pbs. Certain filetypes, e.g. BAM and MAF, use these for storing index data.
Thanks for using Galaxy, Dan On Aug 23, 2011, at 4:04 PM, Chorny, Ilya wrote: > Can someone point me to a tool which writes to this directory? I made some > changes to the code to run as actual user but cannot find a tools that writes > to this directory. > > Thanks, > > Ilya > > > Ilya Chorny Ph.D. > Bioinformatics Scientist I > Illumina, Inc. > 9885 Towne Centre Drive > San Diego, CA 92121 > Work: 858.202.4582 > Email: icho...@illumina.com > Website: www.illumina.com > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/