Edward Kirton wrote:
> hi, we are getting the following error migrating from 79 to 80.
> curiously, my own galaxy didn't have this problem, but another
> developer here was getting this error.  i moved him from sqlite to
> postgres but that didn't help.
> thanks for any assistance,
> ed

Hi Ed,

Is this with the current galaxy-dist version?

--nate

> 
> Migrating 79 -> 80...
> galaxy.model.migrate.check INFO 2011-08-31 13:15:31,446
> Traceback (most recent call last):
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/web/buildapp.py",
> line 82, in app_factory
>     app = UniverseApplication( global_conf = global_conf, **kwargs )
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/app.py",
> line 32, in __init__
>     create_or_verify_database( db_url, kwargs.get( 'global_conf', {}
> ).get( '__file__', None ), self.config.database_engine_options )
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/model/migrate/check.py",
> line 67, in create_or_verify_database
>     migrate_to_current_version( engine, db_schema )
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/model/migrate/check.py",
> line 125, in migrate_to_current_version
>     schema.runchange( ver, change, changeset.step )
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/schema.py",
> line 184, in runchange
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
> line 100, in run
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
> line 112, in _func
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
> line 108, in module
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
> line 65, in verify_module
>   File 
> "/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/util/importpath.py",
> line 12, in import_path
>   File "lib/galaxy/model/migrate/versions/0080_quota_tables.py", line
> 29, in <module>
>     Column( "bytes", BigInteger ),
> NameError: name 'BigInteger' is not defined
> 
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