I am working on a local install of Galaxy and when running a test data set I
get this error when invoking the Fastqc commans:
/home/mnkyboy/galaxy-dist/tools/rgenetics/rgFastQC.py", line 20
SyntaxError: invalid syntax
This is Illumina data from a single tile of qseq.txt data converted to FASTQ
and run through the FASTQ groomer. Fastqc is working properly outside of
Galaxy so any advice would be appreciated.
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