I made some changes to the cufflinks and tophat wrapper to pull gtf files from 
an indexed loc file as  opposed to from history. The diff's are attached. I 
made it an optional feature. Please let me know if this makes its way into 
galaxy-central.

Best,

Ilya

Ilya Chorny Ph.D.
Bioinformatics Scientist I
Illumina, Inc.
9885 Towne Centre Drive
San Diego, CA 92121
Work: 858.202.4582
Email: icho...@illumina.com<mailto:icho...@illumina.com>
Website: www.illumina.com<http://www.illumina.com>


Attachment: cufflinks_wrapper.xml.diff
Description: cufflinks_wrapper.xml.diff

Attachment: tophat_wrapper.xml.diff
Description: tophat_wrapper.xml.diff

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to