When I try to link file paths into a shared data library from the admin menu it 
fails. I get the following in the log file:

galaxy.jobs DEBUG 2011-11-11 13:24:38,280 (2645) Changing ownership of working  
directory with: /usr/bin/sudo -E 
./database/job_working_directory/2645 galaxy 504
galaxy.jobs ERROR 2011-11-11 13:24:38,771 fail(): Missing output file in 
working  directory:
[Errno 13] Permission denied: '/bioinfoSD/ichorny/test.bam'
galaxy.datatypes.metadata DEBUG 2011-11-11 13:24:38,919 Cleaning up external 
metadata files

STDOUT has the following :

Job 2645's output dataset(s) could not be read

Also my file get erased:


Any thoughts?



Ilya Chorny Ph.D.
Bioinformatics Scientist I
Illumina, Inc.
9885 Towne Centre Drive
San Diego, CA 92121
Work: 858.202.4582
Email: icho...@illumina.com<mailto:icho...@illumina.com>
Website: www.illumina.com<http://www.illumina.com>

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