On Nov 23, 2011, at 11:10 AM, Giota Kottara wrote:

> Dear galaxy developers, 
> 
> I am trying to integrate an executable tool in a private instance of galaxy. 
> I stored the configuration .xml file and the executable in tools folder of 
> Galaxy and the tool appears in the homepage. Nevertheless when i am running 
> the tool it doesn't seem to find the executable. Am I forgetting something? 

Hi Giota,

I've moved this over to the galaxy-dev list since it pertains to tool 
development.

Executables will need to be on the $PATH of the user running Galaxy.  Could you 
share the error messages you receive when you run the tool?

--nate

> 
> Thank you in advance
> Giota Kottara
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