Hi, I am running bwa using reference sacCer2. I have locally installed data for sacCer2 and the following line in builds.txt:

sacCer2 S. cerevisiae June 2008 (sacCer2)

This seems to work fine for other tools (e.g extracting genomic sequence).

When I run bwa the job runs correctly but the database field is not set properly. I get the following instead:

Project-Id-Version: PACKAGE VERSION Report-Msgid-Bugs-To: POT-Creation-Date: 2008-09-21 18:33+0900 PO-Revision-Date: 2009-03-17 03:55-0400 Last-Translator: FULL NAME Language-Team: en Plural-Forms: nplurals=2; plural=(n != 1) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit Generated-By: Babel 0.9.4

Any ideas where this is coming from?

Shaun Webb

The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336.

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