On Tue, Jan 3, 2012 at 4:21 PM, Ryan <ngsbioinformat...@gmail.com> wrote:
> Hi all - I had this problem once before with a previous installation, and > thought it was fixed, but I'm seeing it again and not sure its related. > > I have Galaxy running with a Proxy server on apache to get /galaxy instead > of using port 8080. I've disabled load balancing and running everything in > one process. I've set up the admin user using: > > admin_users = myem...@mydomain.edu > > then restarted Galaxy. I was already logged in, refreshed the page, and > didn't see the Admin page, so I logged out. I tried to log back in but get > redirected to the main galaxy page and I'm still not logged in. I checked > the galaxy logs and see the following: > > serving on 0.0.0.0:8080 view at http://127.0.0.1:8080 > galaxy.web.framework DEBUG 2012-01-03 16:18:29,994 Error: this request > returned None from get_history(): http://bic/galaxy/ > 10.24.51.101 - - [03/Jan/2012:16:18:29 -0400] "GET /galaxy/ HTTP/1.1" 200 > - "-" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_2) AppleWebKit/534.52.7 > (KHTML, like Gecko) Version/5.1.2 Safari/534.52.7" > 10.24.51.101 - - [03/Jan/2012:16:18:30 -0400] "GET /galaxy/root/tool_menu > HTTP/1.1" 200 - "http://bic/galaxy/"; "Mozilla/5.0 (Macintosh; Intel Mac > OS X 10_7_2) AppleWebKit/534.52.7 (KHTML, like Gecko) Version/5.1.2 > Safari/534.52.7" > 10.24.51.101 - - [03/Jan/2012:16:18:30 -0400] "GET /galaxy/history > HTTP/1.1" 200 - "http://bic/galaxy/"; "Mozilla/5.0 (Macintosh; Intel Mac > OS X 10_7_2) AppleWebKit/534.52.7 (KHTML, like Gecko) Version/5.1.2 > Safari/534.52.7" > galaxy.web.framework DEBUG 2012-01-03 16:18:30,594 Error: this request > returned None from get_history(): http://bic/galaxy/root/user_get_usage > 10.24.51.101 - - [03/Jan/2012:16:18:30 -0400] "POST > /galaxy/root/user_get_usage HTTP/1.1" 500 - "http://bic/galaxy/history"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_2) AppleWebKit/534.52.7 > (KHTML, like Gecko) Version/5.1.2 Safari/534.52.7" > Error - <type 'exceptions.AssertionError'>: Could not determine anonymous > user's history. > URL: http://bic/galaxy/root/user_get_usage > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/exceptions/errormiddleware.py', > line 143 in __call__ > app_iter = self.application(environ, start_response) > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/recursive.py', > line 80 in __call__ > return self.application(environ, start_response) > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py', > line 632 in __call__ > return self.application(environ, start_response) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 160 > in __call__ > body = method( trans, **kwargs ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py', line > 67 in decorator > return simplejson.dumps( func( self, trans, *args, **kwargs ) ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/controllers/root.py', line > 203 in user_get_usage > return self.__user_get_usage( trans ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/controllers/root.py', line > 206 in __user_get_usage > usage = trans.app.quota_agent.get_usage( trans ) > File '/home/galaxy/galaxy-dist/lib/galaxy/quota/__init__.py', line 29 in > get_usage > assert history, "Could not determine anonymous user's history." > AssertionError: Could not determine anonymous user's history. > > > CGI Variables > ------------- > CONTENT_LENGTH: '-1' > HTTP_ACCEPT: 'application/json, text/javascript, */*; q=0.01' > HTTP_ACCEPT_ENCODING: 'gzip, deflate' > HTTP_ACCEPT_LANGUAGE: 'en-us' > HTTP_CONNECTION: 'Keep-Alive' > HTTP_COOKIE: > 'galaxysession=c6ca0ddb55be603a60ab36dc18d043e05577a892e93c9dadb26d3a1556c8c957dfed888be5af1bfd; > galaxysession=c6ca0ddb55be603a1703b65966de4e010d7a3dd39f711df6d65d3ab9d5876cfd9280ce1808870f14' > HTTP_HOST: 'bic' > HTTP_ORIGIN: 'http://bic' > HTTP_REFERER: 'http://bic/galaxy/history' > HTTP_USER_AGENT: 'Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_2) > AppleWebKit/534.52.7 (KHTML, like Gecko) Version/5.1.2 Safari/534.52.7' > HTTP_X_REQUESTED_WITH: 'XMLHttpRequest' > PATH_INFO: '/root/user_get_usage' > REMOTE_ADDR: '10.24.51.101' > REQUEST_METHOD: 'POST' > SCRIPT_NAME: '/galaxy' > SERVER_NAME: 'bic.cag.chop.edu' > SERVER_PORT: '8080' > SERVER_PROTOCOL: 'HTTP/1.1' > > > Configuration > ------------- > __file__: '/home/galaxy/galaxy-dist/universe_wsgi.ini' > admin_users: 'golh...@gmail.com' > apache_xsendfile: 'True' > cookie_path: '/galaxy' > database_connection: 'postgres:///galaxy' > database_engine_option_server_side_cursors: 'True' > database_engine_option_strategy: 'threadlocal' > debug: 'False' > default_cluster_job_runner: 'pbs:///' > enable_pages: 'True' > here: '/home/galaxy/galaxy-dist' > new_file_path: '/home/galaxy/galaxy-dist/database/tmp' > nglims_config_file: 'tool-data/nglims.yaml' > set_metadata_externally: 'True' > start_job_runners: 'pbs' > static_cache_time: '360' > static_dir: '/home/galaxy/galaxy-dist/static/' > static_enabled: 'True' > static_favicon_dir: '/home/galaxy/galaxy-dist/static/favicon.ico' > static_images_dir: '/home/galaxy/galaxy-dist/static/images' > static_scripts_dir: '/home/galaxy/galaxy-dist/static/scripts/' > static_style_dir: '/home/galaxy/galaxy-dist/static/june_2007_style/blue' > use_interactive: 'False' > use_nglims: 'False' > > > WSGI Variables > -------------- > application: <paste.recursive.RecursiveMiddleware object at 0x1ae5cf10> > paste.cookies: (<SimpleCookie: > galaxysession='c6ca0ddb55be603a1703b65966de4e010d7a3dd39f711df6d65d3ab9d5876cfd9280ce1808870f14'>, > 'galaxysession=c6ca0ddb55be603a60ab36dc18d043e05577a892e93c9dadb26d3a1556c8c957dfed888be5af1bfd; > galaxysession=c6ca0ddb55be603a1703b65966de4e010d7a3dd39f711df6d65d3ab9d5876cfd9280ce1808870f14') > paste.expected_exceptions: [<class 'paste.httpexceptions.HTTPException'>] > paste.httpexceptions: <paste.httpexceptions.HTTPExceptionHandler object > at 0x1ae5cd50> > paste.httpserver.thread_pool: <paste.httpserver.ThreadPool object at > 0x16b60990> > paste.recursive.forward: <paste.recursive.Forwarder from /galaxy> > paste.recursive.include: <paste.recursive.Includer from /galaxy> > paste.recursive.include_app_iter: <paste.recursive.IncluderAppIter from > /galaxy> > paste.recursive.script_name: '/galaxy' > paste.throw_errors: True > webob._parsed_post_vars: (MultiDict([]), <FakeCGIBody at 1b856fd0 > viewing MultiDict([])>) > webob._parsed_query_vars: (MultiDict([]), '') > wsgi process: 'Multithreaded' > ------------------------------------------------------------ > > > First, I'm not sure that's normal. It doesn't seem to be related, because > it happens even if I bring up a new Galaxy page. > > I can't log in as a user as well. There is no error in the galaxy log file > so I'm not sure how to track this one down. > > Just some added information....I found the cause of this. This started happening when I added Apache as a proxy server. I created and added the following to /etc/httpd/conf.d/galaxy.conf: RewriteEngine on RewriteRule ^/galaxy$ /galaxy/ [R] RewriteRule ^/galaxy/static/style/(.*) /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L] RewriteRule ^/galaxy/static/scripts/(.*) /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L] RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L] RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico [L] RewriteRule ^/galaxy/robots.txt /home/galaxy//galaxy-dist/static/robots.txt [L] RewriteRule ^/galaxy(.*) http://localhost:8080$1 [P] Then modified universe_wsgi.ini: filter-with = proxy-prefix cookie_path = /galaxy After re-starting Apache and Galaxy and see the error.
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