On Jan 5, 2012, at 1:10 PM, Ryan Golhar wrote:
> I discovered the problem. My pbs queue has a wall time restriction of 3600
> Is there a way to configure Galaxy to keep the job files for only failed
> jobs? I'd like to keep these two settings on, but find it unnecessary if
> jobs successfully complete.
> The other option I would ask is to include the output of failed jobs in the
> runner log...
This could be extremely large, depending on the output, and might make it
difficult to parse logs. Hopefully the cleanup_job = onsuccess as provided by
Dannon would be a suitable replacement, however.
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