Take a look at the section entitled "Job runner URL" on
http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Cluster. But as I
understand it, you don't need to do anything since the drmaa library is
part of your SGE installation. Just make the node Galaxy runs on an exec
On Mon, Jan 9, 2012 at 8:45 PM, Derrick LIN <klin...@gmail.com> wrote:
> Hi guys,
> I am trying to configure our test galaxy to run on our SGE cluster
> This is my first time to come across to drmaa, so a bit confused.
> I installed teh galaxy on a NFS location where can be accessed
> clsuter-wide. I have configured in universe_wsgi.ini:
> start_job_runners = drmaa
> default_cluster_job_runner = drmaa:///
> and export the libdrmaa path:
> export DRMAA_LIBRARY_PATH=/opt/sge/lib/lx-amd64/libdrmaa.so.1.0
> Sound like that's all. But I am not sure how galaxy can actually bind to
> my cluster? Anywhere I need to specify the qmaster URL etc?
> Or simply configure galaxy host to be a submission host of the cluster,
> the galaxy will fetch all information by itself?
> Kind regards,
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Please keep all replies on the list by using "reply all"
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and other Galaxy lists, please use the interface at: