Yes, thats the current -dist.
I hope I don't regret saying this, but we are pushing for a new release coming
real soon, so you may want to hold off on the update if it will require
extensive testing on your end.
Thanks for using Galaxy,
On Jan 17, 2012, at 9:13 AM, Bossers, Alex wrote:
> any idea when the next dist release is scheduled? We need to upgrade our wur
> instance seriously and from then keep up the pace, but it would be a pity if
> we upgrade and extensively test it now, while the new release is out a few
> days later.
> The latest is from November 18th right?!
> Van: galaxy-dev-boun...@lists.bx.psu.edu
> [galaxy-dev-boun...@lists.bx.psu.edu] namens Daniel Blankenberg
> Verzonden: dinsdag 17 januari 2012 15:09
> Aan: igv-h...@googlegroups.com
> CC: email@example.com; jrobi...@broadinstitute.org
> Onderwerp: Re: [galaxy-dev] Share some code (xml) to wrap IGV itself as a
> Galaxy visualizer
> Hi Ming,
> From Galaxy, you can currently view BAM and VCF (VCF is available in
> -central, but will be in the next -dist release) files within IGV. To do
> this on a local set up, you will need to have your Galaxy instance behind a
> proxy (e.g. nginx or apache); this enables byte-range requests. In the
> datatypes_conf.xml file, make sure that '<display file="igv/bam.xml" />' and
> '<display file="igv/vcf.xml" />' are not commented out. Within Galaxy, your
> BAM or VCF file should have the dbkey set to a build that is configured to be
> viewable at IGV (see tool-data/shared/igv/igv_build_sites.txt).
> Please let us know if we can provide additional assistance.
> Thanks for using Galaxy,
> On Jan 14, 2012, at 10:09 PM,
> bt.microzh...@gmail.com<mailto:bt.microzh...@gmail.com> wrote:
> Hi Guys,
> I am glad to hear form Jim Robinson that exists some code could wrap IGV
> as a Galaxy visualizer. Recently, i implemented local Galaxy instant and
> wanted to integrate
> IGV as a visualizer. I'm looking forward your reply.
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