Hi,
Actually I am not computer expert as well. I have just started to work in
this area. so I am not able to figure out how to solve this problem. I
request you to elaborate on what you meant in your previous mail.

Thanks in advance





> As I wrote in my previous e-mail: "Please send all follow-up with a cc
to the mailing list ("reply-all")."
> In order to debug you situation you need to simulate a complete
> commandline, the same Galaxy is doing.
> Regards, Hans
> On 01/23/2012 05:35 AM, Vidya .H.K wrote:
>> Hi,
>> Sorry for delayed reply. When I execute "macs_wrapper.py" on command line,
>> I get the following error.
>> python macs_wrapper.py
>>    File "<stdin>", line 1
>>      python macs_wrapper.py
>> Thanks in advance
>>> On 01/10/2012 06:31 AM, Vidya .H.K wrote:
>>>> Hi,
>>>> I think macs is exceutable with galaxy user.
>>> what happens if you execute "macs_wrapper.py" on the command line?
Regards, Hans
>>> PS: Please send all follow-up with a cc to the mailing list
>>> ("reply-all").
>>>>> On 01/09/2012 05:04 AM, Vidya .H.K wrote:
>>>>>> Hi,
>>>>>> I am new user to galaxy. I have installed galaxy on the Linux local
server
>>>>>> for ChIP-seq analysis. While running MACS, an error is flagged
>>>>>>     "An error occurred running this job: /bin/sh: macs: not found"
.
>>>>>> I have set the path for macs in /bin. But still the error persists. It
>>>>>> would be great if any one help me resolve this problem.
>>>>> Hi Vidya
>>>>> Is macs executable for the galaxy user (ie the user the galaxy
server
>>>>> is
>>>>> running as) ?
>>>>> Regards, Hans
>>>>>> Thanks in advance.
>>>>>> Regards
>>>>>> vidya
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>>>>









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