On Jan 30, 2012, at 1:04 PM, Shantanu Pavgi wrote:
>
> I see following warning messages in galaxy logs after a job finishes up. Does
> it mean something is misconfigured or a tool did not generate stdout and
> stderr files?
>
> {{{
> galaxy.datatypes.metadata DEBUG 2012-01-30 11:52:07,345 loading metadata from
> file for: HistoryDatasetAssociation 7
> galaxy.jobs DEBUG 2012-01-30 11:52:07,743 job 7 ended
> galaxy.datatypes.metadata DEBUG 2012-01-30 11:52:07,743 Cleaning up external
> metadata files
> galaxy.jobs.runners.drmaa WARNING 2012-01-30 11:52:07,806 Unable to cleanup:
> [Errno 2] No such file or directory:
> '/scratch/galaxy_personal_install_files/job_working_directory/000/7/7.drmout'
> galaxy.jobs.runners.drmaa WARNING 2012-01-30 11:52:07,807 Unable to cleanup:
> [Errno 2] No such file or directory:
> '/scratch/galaxy_personal_install_files/job_working_directory/000/7/7.drmerr'
>
> }}}
Are the tools' STDOUT and STDERR being properly read by Galaxy after the job
completes?
--nate
>
> --
> Thanks,
> Shantanu
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