Minimal case is a single-node workflow with FastQC (tophat also had the same 
problem):

http://test.g2.bx.psu.edu/u/cjfields/w/test

maybe it's tool-specific?

chris


On Feb 3, 2012, at 1:10 AM, Dannon Baker wrote:

> Can you share a workflow that's failing for you on test with me?  I just 
> tried a simple workflow with nothing but an input and FastQC and ran with 
> multiple inputs successfully.
> 
> Thanks!
> 
> Dannon
> 
> 
> On Feb 2, 2012, at 11:15 PM, Fields, Christopher J wrote:
> 
>> Just filed as Issue #714 on bitbucket.  I noticed that multiple input seems 
>> to be broken on workflows when selecting more that one file (a single file 
>> works).  This is happening on our local instance, using Jan 27 galaxy-dist 
>> release, as well as both main/test.g2.bx.psu.edu Galaxy servers (latter 
>> sites just report a server error).  Debugging output:
>> 
>> URL: http://galaxy.igb.uiuc.edu/workflow/run?id=a799d38679e985db
>> File 
>> '/home/a-m/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/exceptions/errormiddleware.py',
>>  line 143 in __call__
>> app_iter = self.application(environ, start_response)
>> File 
>> '/home/a-m/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py',
>>  line 98 in __call__
>> environ, self.app)
>> File 
>> '/home/a-m/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py', 
>> line 539 in intercept_output
>> app_iter = application(environ, replacement_start_response)
>> File 
>> '/home/a-m/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/recursive.py', 
>> line 80 in __call__
>> return self.application(environ, start_response)
>> File 
>> '/home/a-m/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/remoteuser.py',
>>  line 111 in __call__
>> return self.app( environ, start_response )
>> File 
>> '/home/a-m/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py',
>>  line 632 in __call__
>> return self.application(environ, start_response)
>> File '/home/a-m/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 
>> 160 in __call__
>> body = method( trans, **kwargs )
>> File '/home/a-m/galaxy/galaxy-dist/lib/galaxy/web/controllers/workflow.py', 
>> line 1458 in run
>> update_only=True, old_errors=old_errors )
>> File '/home/a-m/galaxy/galaxy-dist/lib/galaxy/tools/__init__.py', line 1460 
>> in update_state
>> value, error = check_param( trans, input, incoming_value, context )
>> File '/home/a-m/galaxy/galaxy-dist/lib/galaxy/tools/parameters/__init__.py', 
>> line 60 in check_param
>> param.validate( filtered_value, trans.history )
>> File '/home/a-m/galaxy/galaxy-dist/lib/galaxy/tools/parameters/basic.py', 
>> line 1547 in validate
>> validator.validate( value, history )
>> File 
>> '/home/a-m/galaxy/galaxy-dist/lib/galaxy/tools/parameters/validation.py', 
>> line 185 in validate
>> if value and value.missing_meta( check = self.check, skip = self.skip ):
>> AttributeError: 'list' object has no attribute 'missing_meta'
>> 
>> chris
>> ___________________________________________________________
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> 


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