Just set up the email alert. Thanks. Lisa On Wed, Feb 22, 2012 at 9:27 PM, Greg Von Kuster <g...@bx.psu.edu> wrote: > Lisa, > > In case you aren't aware, you can set your user preferences for your account > in the tool shed to receive an email message when a new repository's first > upload occurs. This would keep you from having to check the tool shed. Go > to User -> Preferences -> Manage your email alerts and you'll see the > following setting. > > > > > > > On Feb 22, 2012, at 8:50 PM, Liusong Yang wrote: > >> Hi Vipin, >> That is a wonderful news and I am eager to see it in tool shed. I am >> going to check tool shed frequently these days to get it asap. >> >> Thanks >> Lisa >> >> On Wed, Feb 22, 2012 at 4:07 PM, Vipin TS <vipin...@gmail.com> wrote: >>> Hi, >>> >>> We have the recent release version of DESeq at our Galaxy instance, >>> >>> http://galaxy.tuebingen.mpg.de/tool_runner?tool_id=deseq >>> >>> I will add the Galaxy wrapper for DESeq in community tool shed in few days. >>> >>> regards, >>> --Vipin >>> >>>> Hi Lisa, >>>> >>>> I am going to send your question over to the galaxy-...@bx.psu.edu mailing >>>> list so that the development community can offer feedback. >>>> >>>> http://wiki.g2.bx.psu.edu/Support#Starting_a_technical.2C_local.2BAC8-cloud_instance.2C_or_development_thread >>>> >>>> Th galaxy-user list is primarily for tool/data usage on the Galaxy public >>>> server. >>>> http://wiki.g2.bx.psu.edu/Mailing%20Lists >>>> >>>> Thanks, >>>> >>>> Jen >>>> Galaxy team >>>> >>>> >>>> -------- Original Message -------- >>>> Subject: [galaxy-user] R scripts for DESeq >>>> Date: Tue, 21 Feb 2012 23:25:35 -0500 >>>> From: Liusong Yang <liusongyang2...@gmail.com> >>>> To: galaxy-u...@lists.bx.psu.edu >>>> >>>> Hello, >>>> >>>> I am planning to put DESeq into galaxy. I am a newcomer for both >>>> Galaxy and R. I have already read all of the related discussion in >>>> this group. I also noticed that there are r_wrapper.sh and DESeq.xml >>>> added into galaxy recently under the path of tools. >>>> >>>> These lines are from r_wrapper.sh. >>>> >>>> ### Run R providing the R script in $1 as standard input and passing >>>> ### the remaining arguments on the command line >>>> >>>> >>>> I guess this means we need to give the DESeq R script to the wrapper >>>> as standard input. My question is where or what is the DESeq R >>>> scripts? I installed R and DESeq package, but I can not fund anything >>>> like DESeq.R or something similar? I feel so confusing now. Any >>>> comments or suggestions would be absolutely appreciated! >>>> >>>> Thanks >>>> >>>> Lisa >>>> ___________________________________________________________ >>>> The Galaxy User list should be used for the discussion of >>>> Galaxy analysis and other features on the public server >>>> at usegalaxy.org. Please keep all replies on the list by >>>> using "reply all" in your mail client. For discussion of >>>> local Galaxy instances and the Galaxy source code, please >>>> use the Galaxy Development list: >>>> >>>> http://lists.bx.psu.edu/listinfo/galaxy-dev >>>> >>>> To manage your subscriptions to this and other Galaxy lists, >>>> please use the interface at: >>>> >>>> http://lists.bx.psu.edu/ >>>> ___________________________________________________________ >>>> >>>> Please keep all replies on the list by using "reply all" >>>> in your mail client. To manage your subscriptions to this >>>> >>>> and other Galaxy lists, please use the interface at: >>>> >>>> http://lists.bx.psu.edu/ >>> >>> >> >> ___________________________________________________________ >> Please keep all replies on the list by using "reply all" >> in your mail client. To manage your subscriptions to this >> and other Galaxy lists, please use the interface at: >> >> http://lists.bx.psu.edu/ >> > >
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