When using the public Galaxy tool shed while learning, please use the test
instance of the tool shed rather than the production instance. I noticed that
you uploaded the filter tool from the Galaxy distribution to the main tool
shed. The public test tool shed is available at
You can trace the paster log of your local tool shed instance typing the
following in a terminal window in your Galaxy installation directory. This
will show you whatever problem is occurring with your local tool shed.
tail -f community_webapp.log
Greg Von Kuster
On Feb 24, 2012, at 4:17 PM, JIE CHEN wrote:
> Hello everyone,
> I'm a new to Galaxy and the tool sheds. Right now i am learning it by reading
> the tutorial and have a problem:
> when i try to start my local tool shed by typing the command "%sh
> run_community.sh" within the galaxy installation directory, nothing happens.
> It just terminate itself immediately without any error message. It's quite
> different from when i start up a local galaxy instance.
> What i did:
> 1)Modify the community_wsgi.ini so that it has the right connection to my own
> MySQL server.
> 2)in cmd prompt, cd to the installation directory
> 3)in cmd prompt, sh run_community.sh
> Thanks a lot. Any help is appreciated.
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Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at: