On Fri, Mar 23, 2012 at 5:07 PM, Luobin Yang <yangl...@isu.edu> wrote:
> Yeah, that's what I was wondering: to update megablast tool to use NCBI
> BLAST+ .
>
> I revised megablast wrapper a bit to use the legacy_blast.pl from NCBI
> BLAST+, but it seems the output format is not compatible with the tool
> (Fetch taxonomic representation) in metagenomic analyses anymore.
>
> So it looks like the only solution at the moment is to have both NCBI NCBI+
> and an old version of BLAST.
>
> Thanks,
> Luobin

I think that was what John Major was talking about earlier this month:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-March/008926.html

Peter
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