Hi Frank,

This should be resolved as of changeset 7057:08fbfeaaf3e1.  Thanks!


On Mar 27, 2012, at 4:37 AM, Frank Sørensen wrote:

> Hi Dannon,
> Unfortunately our server is (still) behind a firewall, so I can't share 
> anything, but I hope you can reproduce the error from the following 
> description.
> If I make a vanilla test workflow say:
> Input Dataset -> Map with BWA for Illumina (single end) -> SAM-to-BAM -> 
> flagstat
> and save it. Then all outputs will show if I run it, even if none of the 
> "snowflakes" are checked which is not logical. It would be better if the 
> output visibility was checked by default, and the user should actively 
> de-select the outputs that should be hidden, but that's another matter.
> If I edit the workflow that I just created, and select the output from 
> flagstat to be visible, then the two other (BWA and SAM-to-BAM) will be 
> hidden when I run it, which they should be. So far so good...
> If I edit the workflow again and select the remaining outputs (BWA and 
> SAM-to-BAM) to be visible and save the workflow, then only BWA will be 
> visible after run, thats a problem, SAM-to-BAM should also be visible since 
> that's what I selected.
> If I want the output from SAM-to-BAM to be visible, I have to edit the 
> workflow again, and de-select visibility of the output from SAM-to-BAM, save 
> the workflow, and re-edit the workflow and select visibility of the output 
> from SAM-to-BAM and save the workflow.
> It seems that selection/de-selection of output visibility only works under 
> some circumstances and not others.
> I can conclude the state of the output visibility on the existing or missing 
> post-hide-action, which is apparent if I select "run workflow", and press 
> "expand all" on the Running workflow screen, so I don't actually have to run 
> the workflow, which is a great help.
> By tweaking my workflows using this editing / re-editing method, it is 
> actually possible to get the visibility of all outputs into the state that I 
> desire, but it is quite cumbersome on larger workflows.
> Regards
> - Frank

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