What version of Galaxy are you using? Your code base should be tracking the
galaxy-central repository on bitbucket in order to use the tool shed with your
local Galaxy instance. The galaxy-central repo is currently around
7201:62bdb265d300, and you can see the version you are running by typing the
following in your Galaxy installation directory.
I believe this behavior will be resolved if you update to the latest code, but
let me know if you continue to bump into problems.
Greg Von Kuster
On May 26, 2012, at 10:51 AM, Björn Grüning wrote:
> has anyone encountered that problem or has an idea how to solve it?
> Traceback (most recent call last):
> File "/home/ctb/galaxy-dist/lib/galaxy/web/buildapp.py", line 82, in
> app = UniverseApplication( global_conf = global_conf, **kwargs )
> File "/home/ctb/galaxy-dist/lib/galaxy/app.py", line 64, in __init__
> File "/home/ctb/galaxy-dist/lib/galaxy/tool_shed/__init__.py", line
> 26, in load_proprietary_datatypes
> load_datatype_items( self.app, tool_shed_repository,
> relative_install_dir )
> File "/home/ctb/galaxy-dist/lib/galaxy/util/shed_util.py", line 1036,
> in load_datatype_items
> app.datatypes_registry.load_datatype_converters( app.toolbox,
> installed_repository_dict=repository_dict, deactivate=deactivate )
> AttributeError: 'UniverseApplication' object has no attribute 'toolbox'
> All files are in one repository ... xml, the python-class und the
> converters. I was able to successfully upload it to our test-toolshed
> but after installing it (also successfully) galaxy is not able to start.
> Also the converters are recognised as tools in the toolshed is that
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Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at: