Hi everyone,

I'm trying with all my best to add an NGS tool into my local Galaxy instance. 
I've added my tool in tool_conf.xml, and made a XML file with all the 
<command>, <param> etc... I think it's pretty ok, and everything is  correctly 
displayed on the Galaxy interface.

However, when I execute my tool, Galaxy says to me :

Error executing tool: cannot find 'database'

And in my shell, I can see : - - [30/May/2012:10:47:01 +0200] "GET /tool_runner?tool_id=myTool 
HTTP/1.1" 200 - "http://localhost:8080/root/tool_menu"; "Mozilla/5.0 (X11; 
Ubuntu; Linux x86_64; rv:12.0) Gecko/20100101 Firefox/12.0"
galaxy.tools ERROR 2012-05-30 10:47:07,424 Exception caught while attempting 
tool execution:
Traceback (most recent call last):
  File "/home/myName/work/galaxy-dist/lib/galaxy/tools/__init__.py", line 1345, 
in handle_input
    _, out_data = self.execute( trans, incoming=params, history=history )
  File "/home/myName/work/galaxy-dist/lib/galaxy/tools/__init__.py", line 1661, 
in execute
    return self.tool_action.execute( self, trans, incoming=incoming, 
set_output_hid=set_output_hid, history=history, **kwargs )
  File "/home/myName/work/galaxy-dist/lib/galaxy/tools/actions/__init__.py", 
line 333, in execute
    data.name = fill_template( output.label, context=params )
  File "/home/myName/work/galaxy-dist/lib/galaxy/util/template.py", line 9, in 
    return str( Template( source=template_text, searchList=[context] ) )
 line 1004, in __str__
    return getattr(self, mainMethName)()
  File "DynamicallyCompiledCheetahTemplate.py", line 83, in respond
NotFound: cannot find 'database' - - [30/May/2012:10:47:07 +0200] "POST /tool_runner/index HTTP/1.1" 
200 - "http://localhost:8080/tool_runner?tool_id=myTool"; "Mozilla/5.0 (X11; 
Ubuntu; Linux x86_64; rv:12.0) Gecko/20100101 Firefox/12.0"

I'm a beginner in computer sciences, so I can't understand since over 1 week 
what's happening ...  Any idea what's wrong with this ?
(I'm using Ubuntu LTS 12.04)

All help will be very very appreciated !

Thank you,

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