On Thu, May 31, 2012 at 12:53 AM, Anthonius deBoer <thondeb...@me.com> wrote:
> Hi,
> I often find my self having to battle with other users of the cluster, even
> for the one-off jobs that someone runs interactively...
> We have setup Fast/short queues and Long queues...
> Is there a way for a tool to sometimes be placed in the fast queue and
> sometimes in the long queue?

Not through Galaxy as far as I know.

> I know I can setup a tool in the universe file and add a -pe option
> there...But is there a way to dynamically assign jobs sometimes to one queue
> and sometimes to another?
> Even an option in the UI would work, since I could make the short queue the
> default for interactive work and people could turn it off in workflows that
> will run for a long time or will run with many samples....
> Thanks
> Thon

This is desirable but complicated. :(

Right now I'd like to be able to allocate jobs to different queues
based on the input data size (and thus the expected compute time
and resource needed), but that is rather complicated. e.g. If you
have a low memory queue and a high memory query.

You might even want different queues according to the user
(e.g. one group might have paid for part of the cluster and get
priority access).

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