This is still not working.

is it just me ?



galaxdev@galaxy1:~$ hg clone https://bitbucket.org/galaxy/galaxy-dist
galaxy-dist3
requesting all changes
adding changesets
adding manifests
adding file changes
added 7149 changesets with 28071 changes to 5807 files
updating to branch default
3772 files updated, 0 files merged, 0 files removed, 0 files unresolved
galaxdev@galaxy1:~$ cd galaxy-dist3
galaxdev@galaxy1:~/galaxy-dist3$ galaxy-slurm-setup
slurm config written to universe_wsgi.ini
drmaa config written to eggs.ini
This is a new install. Do you also want to configure this instance for
production? [Y/N]: n
galaxdev@galaxy1:~/galaxy-dist3$
galaxdev@galaxy1:~/galaxy-dist3$ sh ./run.sh
Initializing community_wsgi.ini from community_wsgi.ini.sample
Initializing datatypes_conf.xml from datatypes_conf.xml.sample
Initializing external_service_types_conf.xml from
external_service_types_conf.xml.sample
Initializing migrated_tools_conf.xml from migrated_tools_conf.xml.sample
Initializing reports_wsgi.ini from reports_wsgi.ini.sample
Initializing shed_tool_conf.xml from shed_tool_conf.xml.sample
Initializing tool_conf.xml from tool_conf.xml.sample
Initializing tool_data_table_conf.xml from tool_data_table_conf.xml.sample
Initializing tool_sheds_conf.xml from tool_sheds_conf.xml.sample
Initializing openid_conf.xml from openid_conf.xml.sample
Initializing tool-data/shared/ucsc/builds.txt from builds.txt.sample
Initializing tool-data/shared/igv/igv_build_sites.txt from
igv_build_sites.txt.sample
Initializing tool-data/shared/rviewer/rviewer_build_sites.txt from
rviewer_build_sites.txt.sample
Initializing tool-data/add_scores.loc from add_scores.loc.sample
Initializing tool-data/alignseq.loc from alignseq.loc.sample
Initializing tool-data/all_fasta.loc from all_fasta.loc.sample
Initializing tool-data/annotation_profiler_options.xml from
annotation_profiler_options.xml.sample
Initializing tool-data/annotation_profiler_valid_builds.txt from
annotation_profiler_valid_builds.txt.sample
Initializing tool-data/bfast_indexes.loc from bfast_indexes.loc.sample
Initializing tool-data/binned_scores.loc from binned_scores.loc.sample
Initializing tool-data/blastdb.loc from blastdb.loc.sample
Initializing tool-data/blastdb_p.loc from blastdb_p.loc.sample
Initializing tool-data/bowtie2_indices.loc from bowtie2_indices.loc.sample
Initializing tool-data/bowtie_indices.loc from bowtie_indices.loc.sample
Initializing tool-data/bowtie_indices_color.loc from
bowtie_indices_color.loc.sample
Initializing tool-data/bwa_index.loc from bwa_index.loc.sample
Initializing tool-data/bwa_index_color.loc from bwa_index_color.loc.sample
Initializing tool-data/ccat_configurations.loc from
ccat_configurations.loc.sample
Initializing tool-data/codingSnps.loc from codingSnps.loc.sample
Initializing tool-data/encode_datasets.loc from encode_datasets.loc.sample
Initializing tool-data/faseq.loc from faseq.loc.sample
Initializing tool-data/funDo.loc from funDo.loc.sample
Initializing tool-data/gatk_annotations.txt from gatk_annotations.txt.sample
Initializing tool-data/gatk_sorted_picard_index.loc from
gatk_sorted_picard_index.loc.sample
Initializing tool-data/lastz_seqs.loc from lastz_seqs.loc.sample
Initializing tool-data/liftOver.loc from liftOver.loc.sample
Initializing tool-data/maf_index.loc from maf_index.loc.sample
Initializing tool-data/maf_pairwise.loc from maf_pairwise.loc.sample
Initializing tool-data/microbial_data.loc from microbial_data.loc.sample
Initializing tool-data/mosaik_index.loc from mosaik_index.loc.sample
Initializing tool-data/ngs_sim_fasta.loc from ngs_sim_fasta.loc.sample
Initializing tool-data/perm_base_index.loc from perm_base_index.loc.sample
Initializing tool-data/perm_color_index.loc from perm_color_index.loc.sample
Initializing tool-data/phastOdds.loc from phastOdds.loc.sample
Initializing tool-data/picard_index.loc from picard_index.loc.sample
Initializing tool-data/quality_scores.loc from quality_scores.loc.sample
Initializing tool-data/regions.loc from regions.loc.sample
Initializing tool-data/sam_fa_indices.loc from sam_fa_indices.loc.sample
Initializing tool-data/sequence_index_base.loc from
sequence_index_base.loc.sample
Initializing tool-data/sequence_index_color.loc from
sequence_index_color.loc.sample
Initializing tool-data/sift_db.loc from sift_db.loc.sample
Initializing tool-data/srma_index.loc from srma_index.loc.sample
Initializing tool-data/twobit.loc from twobit.loc.sample
Initializing static/welcome.html from welcome.html.sample
Some eggs are out of date, attempting to fetch...
Fetched 
http://eggs.g2.bx.psu.edu/pysam/pysam-0.4.2_kanwei_b10f6e722e9a-py2.7-linux-x86_64-ucs4.egg
Fetched http://eggs.g2.bx.psu.edu/lrucache/lrucache-0.2-py2.7.egg
Fetched 
http://eggs.g2.bx.psu.edu/sqlalchemy_migrate/sqlalchemy_migrate-0.5.4-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/pexpect/pexpect-2.4-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/amqplib/amqplib-0.6.1-py2.7.egg
Fetched 
http://eggs.g2.bx.psu.edu/bx_python/bx_python-0.7.1_7b95ff194725-py2.7-linux-x86_64-ucs4.egg
Fetched http://eggs.g2.bx.psu.edu/docutils/docutils-0.7-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/numpy/numpy-1.6.0-py2.7-linux-x86_64-ucs4.egg
Fetched 
http://eggs.g2.bx.psu.edu/pysqlite/pysqlite-2.5.6_3.6.17_static-py2.7-linux-x86_64-ucs4.egg
Fetched 
http://eggs.g2.bx.psu.edu/simplejson/simplejson-2.1.1-py2.7-linux-x86_64-ucs4.egg
Fetched 
http://eggs.g2.bx.psu.edu/python_lzo/python_lzo-1.08_2.03_static-py2.7-linux-x86_64-ucs4.egg
Fetched http://eggs.g2.bx.psu.edu/wchartype/wchartype-0.1-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/twill/twill-0.9-py2.7.egg
Fetched 
http://eggs.g2.bx.psu.edu/elementtree/elementtree-1.2.6_20050316-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/decorator/decorator-3.1.2-py2.7.egg
Fetched 
http://eggs.g2.bx.psu.edu/pycrypto/pycrypto-2.0.1-py2.7-linux-x86_64-ucs4.egg
Fetched http://eggs.g2.bx.psu.edu/boto/boto-2.2.2-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/python_daemon/python_daemon-1.5.5-py2.7.egg
Fetched 
http://eggs.g2.bx.psu.edu/mercurial/mercurial-2.1.2-py2.7-linux-x86_64-ucs4.egg
Fetched http://eggs.g2.bx.psu.edu/wsgiref/wsgiref-0.1.2-py2.7.egg
Fetched http://eggs.g2.bx.psu.edu/nose/nose-0.11.1-py2.7.egg
svgfig 1.1.6 couldn't be downloaded automatically.  You can try
building it by hand with:
  python scripts/scramble.py -e svgfig
Fetch failed.







On Sun, Jul 15, 2012 at 1:09 PM, Di Pe <dip...@gmail.com> wrote:
> Hi,
>
> there seems to be an issue with pulling this egg at least since yesterday.
>
> Some eggs are out of date, attempting to fetch...
> Fetched 
> http://eggs.g2.bx.psu.edu/pysam/pysam-0.4.2_kanwei_b10f6e722e9a-py2.7-linux-x86_64-ucs4.egg
> Fetched http://eggs.g2.bx.psu.edu/lrucache/lrucache-0.2-py2.7.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/sqlalchemy_migrate/sqlalchemy_migrate-0.5.4-py2.7.egg
> Fetched http://eggs.g2.bx.psu.edu/pexpect/pexpect-2.4-py2.7.egg
> Fetched http://eggs.g2.bx.psu.edu/amqplib/amqplib-0.6.1-py2.7.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/bx_python/bx_python-0.7.1_7b95ff194725-py2.7-linux-x86_64-ucs4.egg
> Fetched http://eggs.g2.bx.psu.edu/docutils/docutils-0.7-py2.7.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/numpy/numpy-1.6.0-py2.7-linux-x86_64-ucs4.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/pysqlite/pysqlite-2.5.6_3.6.17_static-py2.7-linux-x86_64-ucs4.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/simplejson/simplejson-2.1.1-py2.7-linux-x86_64-ucs4.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/python_lzo/python_lzo-1.08_2.03_static-py2.7-linux-x86_64-ucs4.egg
> Fetched http://eggs.g2.bx.psu.edu/wchartype/wchartype-0.1-py2.7.egg
> Fetched http://eggs.g2.bx.psu.edu/twill/twill-0.9-py2.7.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/elementtree/elementtree-1.2.6_20050316-py2.7.egg
> Fetched http://eggs.g2.bx.psu.edu/decorator/decorator-3.1.2-py2.7.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/pycrypto/pycrypto-2.0.1-py2.7-linux-x86_64-ucs4.egg
> Fetched http://eggs.g2.bx.psu.edu/boto/boto-2.2.2-py2.7.egg
> Fetched http://eggs.g2.bx.psu.edu/python_daemon/python_daemon-1.5.5-py2.7.egg
> Fetched 
> http://eggs.g2.bx.psu.edu/mercurial/mercurial-2.1.2-py2.7-linux-x86_64-ucs4.egg
> Fetched http://eggs.g2.bx.psu.edu/wsgiref/wsgiref-0.1.2-py2.7.egg
> Fetched http://eggs.g2.bx.psu.edu/nose/nose-0.11.1-py2.7.egg
> svgfig 1.1.6 couldn't be downloaded automatically.  You can try
> building it by hand with:
>   python scripts/scramble.py -e svgfig
> Fetch failed.
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