> You'll need to add the display_in_upload attribute to your local version of
> the datatypes_conf.xml file installed with your emboss_datatypes repository
> from the tool shed.
I'am afraid this does not work. At least not in my hands. Like I indicated
before, it seems like the upload tool does not take the tool shed
emboss_datatypes into account, with or without the display_in_upload attribute
It seems to work only if you transfer the entire data type definition line to
the main galaxy datatypes_conf.xml
That is the workaround I currently use.
> This may result in a merge at some point if the contents of the
> datatypes_conf.xml file changes in the emboss_datatypes repository in the
> main tool shed and you pull the updates to your
> local repository.
> Greg Von Kuster
>> Hi Björn,
>> I think the issue is that the genbank datatype is coming in via the tool
>> shed and is not taken into account by the upload tool. The genbank datatype
>> is defined in
>> I have added the display_in_upload attribute in the latter file for the
>> genbank datatype, restarted Galaxy but the type did not appear in the
>> Should the genbank datatype be added to the main galaxy datatypes_conf.xml ?
>> Or is it better to explicitly add the emboss' datatypes_conf.xml to the
>> universe_wsgi.ini (but this will break the tool shed update system, right) ?
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