On Wed, Sep 12, 2012 at 12:16 AM, Kenneth R. Auerbach
<kauerb...@comcast.net> wrote:
> Hello,
>
> Can anyone tell me why I keep getting this error when I try to do a blast
> search in Galaxy?  I checked that the nr database file was there and had the
> right permissions. Does this error mean that Galaxy can't find the nr file
> or does it mean something else?
>
> ------------
> An error occurred running this job:BLAST Database error: No alias or index
> file found for protein database
> [/9720/genome_references/ncbi/nr-protein-db/nr-newstyle/nr] in search path
> [/9720/galaxyprod/galaxy-dist/database/job_working_directory/1485::]
> Return error code 2 from command:
> blast
> -------------
>
> Thank you.
> Ken.

I already replied to this question when you asked yesterday (and
used a more specific email subject - "Galaxy error" is not helpful):
http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-September/011066.html

Regards,

Peter
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