Hmm, ok this tool shed is all new to me.  I followed the instructions
until when I click on the "preview and install", I get this error:

Not Found

The resource could not be found.
No action for /admin_toolshed/prepare_for_install

On Thu, Sep 13, 2012 at 2:51 PM, Greg Von Kuster <g...@bx.psu.edu> wrote:
> Hi Paul,
>
> It seems that you probably did not use the Emboss tools in your local Galaxy 
> instance before (maybe you have a new instance).  If this is the case, you 
> can install the emboss_datatypes repository and the emboss_5 repository from 
> the main Galaxy tool shed using the Admin UI features on your local galaxy 
> instance.  See the following sections of the tool shed wiki for details.
>
> http://wiki.g2.bx.psu.edu/Tool%20Shed#Automatic_installation_of_Galaxy_tool_shed_repository_tools_into_a_local_Galaxy_instance
>
> http://wiki.g2.bx.psu.edu/Tool%20Shed#Automatic_installation_of_Galaxy_tool_shed_repository_data_types_into_a_local_Galaxy_instance
>
> Greg Von Kuster
>
>
> On Sep 13, 2012, at 4:46 PM, Paul Tanger wrote:
>
>> Hi,
>>
>> I'm trying to enable all the emboss tools on a local galaxy install.
>> I found this tidbit (below) which I thought might help, but when I
>> look at the tool_conf.xml, I don't see a list of emboss tools to
>> uncomment.
>> What should I try next?
>>
>>
>> Kelly Vincent kpvincent at bx.psu.edu
>> Fri Jan 14 11:26:37 EST 2011
>> Previous message: [galaxy-dev] Restricted user builds
>> Next message: [galaxy-dev] API connection error
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>> Rob,
>>
>> When you start the Galaxy server, it looks in tool_conf.xml for which
>> tools to load. Note that functional tests use tool_conf.xml.sample,
>> and we leave the EMBOSS tools commented out in that file, so your
>> tool_conf.xml file will still have them commented out if you haven't
>> changed that. Uncomment the relevant lines and the EMBOSS tools should
>> show up. After making changes to tool_conf.xml, you'll have to restart
>> the server.
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