On Sep 11, 2012, at 12:09 PM, Fenglou Mao wrote:

> Galaxy imported a library which already existed in the python system folder. 
> See the error message below.
> 
> /home/xxxxx/work/galaxy-dist/lib/galaxy/__init__.py:79: UserWarning: Module 
> markupsafe was already imported from 
> /usr/lib64/python2.6/site-packages/markupsafe/__init__.pyc, but 
> /home/xxxxx/work/galaxy-dist/eggs/MarkupSafe-0.12-py2.6-linux-x86_64-ucs4.egg 
> is being added to sys.path
>   self.check_version_conflict()
> 
> The system package is python-markupsafe-0.9.2-4.el6.x86_64
> Galaxy has a newer version, it is MarkupSafe-0.12-py2.6-linux-x86_64-ucs4.egg
> 
> Any idea how to resolve this problem?

Hi Fenglou,

Please set up a virtualenv as described on:

    http://usegalaxy.org/production/

--nate

> 
> Thanks,
> Fenglou
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> 
>  http://lists.bx.psu.edu/


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to