You can get to the captured stdout/stderr in the UI by clicking the
info (i) button for the dataset. The way I would normally debug
outside of the Galaxy UI is to take the command line generated by
Galaxy (which should be logged) and run it outside Galaxy.
On Fri, Oct 12, 2012 at 9:35 AM, Mark Johnson <mjohn...@ncbi.nlm.nih.gov> wrote:
> My problem is I can't get print debugging to work. Galaxy captures both
> stdout and stderr and stashes them in a db somewhere.
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