If you want to keep your tools separated by name and version
(recommended) see the section "Managed Tool Dependencies" at
http://wiki.g2.bx.psu.edu/Admin/Config/Tool%20Dependencies

--
James Taylor, Assistant Professor, Biology/CS, Emory University


On Mon, Nov 5, 2012 at 12:44 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> On Mon, Nov 5, 2012 at 5:34 PM, Joel Rosenberg <thisisj...@hotmail.com> wrote:
>>
>> Sorry for bumping this, but it seems like such a standard boilerplate
>> step of installing a tool that someone muts know how.
>>
>> -Joel
>>
>
> Personally I've just been installing them on the $PATH, typically
> under $HOME/bin of the Galaxy user which is on our Galaxy
> user account's $PATH.
>
> Peter
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