Yes, primer3 is available as a command line tool, it was just an example,
the one I'm actually after is optimus primer..
I'm sure there are several web-tools out there that would be nice to get to
Any Ideas?? 



On 5/11/12 11:18 PM, "Peter Cock" <> wrote:

> On Mon, Nov 5, 2012 at 5:53 AM, Franco Caramia
> <> wrote:
>> Hi list,
>> I¹m trying to find documentation or examples on how to wrap web-tools
>> (like primer3, optimus primer) in Galaxy.
>> Any useful links or examples would be of great help.
>> Thanks,
>> Franco
> I'm not answering your question, but Primer3 is available as a command
> line tool, so why do you want to wrap a web-tool version of it?
> Also EMBOSS have a command line wrapper providing a conventional
> Unix API to primer3. There are some EMBOSS wrappers in the Galaxy
> ToolShed, but I don't see one for primer3 yet.
> Regards,
> Peter

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