On Fri, Nov 16, 2012 at 2:35 PM, Joshua Orvis <jor...@gmail.com> wrote:
> If I removed that line how is it still part of the call? Is Galaxy caching
> the xml tool files?

Did you restart Galaxy? Tool configuration files are read at startup.
You can also force a tool to be reloaded in the admin interface.

> Also, is there a way to see the precise commands being
> executed by Galaxy for any particular tool?

These are logged at the debug level, either to the console or
paster.log depending on how you start Galaxy.
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to