Can we also fetch virus file from some sources like this?

Thanks

Kanwar

On Mon, Nov 26, 2012 at 4:25 AM, Joachim Jacob <joachim.ja...@vib.be> wrote:

> You can use 'Get data' --> 'UCSC Main' to fetch an GTF (gene transfer
> format) format of your species of interest, Human in this case. I tend to
> use the Ensembl genes track (from the Genes and gene prediction tracks).
>
> Make sure you use GTF as output, and send to Galaxy!
>
> Cheers,
> Joachim
>
> Joachim Jacob, PhD
>
> Rijvisschestraat 120, 9052 Zwijnaarde
> Tel: +32 9 244.66.34
> Bioinformatics Training and Services (BITS)
> http://www.bits.vib.be
> @bitsatvib
>
> On 11/26/2012 01:07 PM, Dr. Mira A. Bisso wrote:
>
>>
>> Dear help;
>>
>> How to get the human annotation file for RNAseq analysis, for mapping by
>> BWA and for RNAseq analysis, on Cufflinks and cuffdiff tools on galaxy?
>>
>> Mira
>>
>> Thanks
>>
>> *image001*
>>
>> **
>>
>> *Mira Bosso, M.Sc, B.D.S*
>>
>> *Research associate*
>>
>> *Pancreatic Islet Biology and Transplantation Unit*
>>
>> *P.O.Box 1180, Dasman 15462, Kuwait
>> Phone:  +965 2224 2999 Ext.2803*
>>
>> *Mob: +96599500197 *
>>
>> *Email: mira.bi...@dasmaninstitute.org <mailto:mira.bisso@**
>> dasmaninstitute.org <mira.bi...@dasmaninstitute.org>>*
>>
>> **
>>
>>
>>
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