On Fri, Nov 30, 2012 at 2:54 PM, Fenglou Mao <feng...@gmail.com> wrote: > That will be a pain since so many tools can use multiple cores, and if I > edit tool XML file, what will happen is I update Galaxy? Will those edited > XML be replaced by the files in Galaxy-dist?
If you modify a tool bundled with Galaxy, then when you do an hg update in simple cases it would all be handled automatically. However, if there was a change in the same part of the code, you would have to do a manual merge (the simplest route is just take the 'official' changes from the Galaxy team, and in the short term discard your local change). i.e. Not a good idea for long term maintenance. The other thread I was referring to was discussing how to move the thread settings into the Galaxy configuration files instead. Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
